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genome variant calling and RNA-seq analysis
A python toolkit providing best-practice pipelines for fully automated high throughput RNA sequencing analysis. It can work with BWA, .bam or .fastq files.
released on 20 June 2014
Extension or Plugin
Full license text: https://github.com/chapmanb/bcbio-nextgen/blob/master/LICENSE.txt
Leaders and contributors
|Brad Chapman||primary contact|
Resources and communication
|geomes and RNA-seq tools user group||Mailing List||https://groups.google.com/forum/#!forum/biovalidation|
This entry (in part or in whole) was last reviewed on 30 March 2018.
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts. A copy of the license is included in the page “GNU Free Documentation License”.
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