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NUT nutrition software
This software help you record what you eat and then analyzes your meals for nutrient levels in terms of the USDA "Daily Value" (the standard for food labeling in the US.
Neuron Health
Neuron is an EHR tool kit that supports inpatient and ambulatory care using a smart longitudinal patient record.
OpenChrom is data analysis a tool for gas chromatography and mass spectrometry. Its functionality and algorithms can be extended using a flexible plugin approach. File formats from various vendors are supported.
Orthanc aims at providing a simple, yet powerful standalone DICOM server. It is designed to improve the DICOM flows in hospitals and to support research about the automated analysis of medical images. Orthanc can turn any computer running Windows or GNU/Linux into a DICOM store (in other words, a mini-PACS system). Its architecture is lightweight and standalone, meaning that no complex database administration is required, nor the installation of third-party dependencies. What makes Orthanc unique is the fact that it provides a RESTful API. Thanks to this major feature, it is possible to drive Orthanc from any computer language. The DICOM tags of the stored medical images can be downloaded in the JSON file format. Furthermore, standard PNG images can be generated on-the-fly from the DICOM instances by Orthanc. Orthanc lets its users focus on the content of the DICOM files, hiding the complexity of the DICOM format and of the DICOM protocol.
SPINA is free software that facilitates calculation of constant structure parameters of endocrine feedback control systems. A first successful implementation applies to evaluation of thyroid function. It allows for calculating the thyroid's maximum secretory capacity (GT or SPINA-GT) and the sum activity of peripheral 5'-deiodinases (GD or SPINA-GD) from levels of TSH, (F)T4 and (F)T3 that have been determined once only (SPINA Thyr). This method is increasingly used in experimental research. SPINA Thyr has been evaluated in clinical trials covering more than 10,000 subjects with various disorders of thyroid homeostais. Additional applications targeting other endocrine feedback loops are currently being developed or prepared, respectively. SPINA Thyr is a free application that calculates GT and GD. Source code is provided for Lazarus and Free Pascal. The program is compatible with most desktop Linux distributions, Mac OS X and Windows.
SimThyr is a continuous simulation program for pituitary-thyroid feedback control. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients. SimThyr is based on a physiologically-grounded nonlinear mathematical theory of thyroid homeostasis. The application supports simulation in time domain and various methods of sensitivity analysis. Source code is provided for Lazarus and Free Pascal. The program is compatible with most desktop Linux distributions, Mac OS X and Windows.
Sispread allows users to simulate the dynamics of an hypothetical infectious disease within a contact network of connected people. It is intended to help people concerned by public health to easily perform epidemic simulations and to analyze their results.
Tkfp is a clinical medical information system suitable for a solo or small group practice. A search engine, SSL secure web server and browser, and a PostGres database are all built in. This package is not maintained anymore. It was originally written and maintained by the family doctor and amateur Tcl programmer Alex Caldwell.
The Medical Image Conversion library consists of a library, a command line utility, and a GUI interface for converting and manipulating medical images. It can convert between commonly used formats in (freely available) research tools, while preserving medical parameters like patient information, slice orientation, voxel dimension and pixel quantitation. The program can also read unsupported files without compression, print pixel values, or extract/reorder specified images. The library can also be used as a framework for your own image format.
YaNuCa is a JavaScript web tool to calculate plans for artificial nutrition (enteral+parenteral) in intensive care patients, with special regard to the different phases of critical illness, stress metabolism and stages of rehabilitation. Proper nutrition can be crucial for the outcome of critically ill patients at every stage of treatment and rehabilitation. This tool has been successfully used for years by two intensive care units at the University Clinic for Internal Medicine in Heidelberg/Germany. It is based on the ESPEN Guidelines for parenteral nutrition in intensive care (ESPEN = European Society for Clinical Nutrition and Metabolism).

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